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1

Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology

Rafael Szczepanowski, Thomas Bekel, Alexander Goesmann, Lutz Krause, Holger Krömeke, Olaf Kaiser, Wolfgang Eichler, Alfred Pühler, Andreas Schlüter

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 707 KB

english, 2008

2

Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems

Peter N. Golyshin, Vitor A.P. Martins Dos Santos, Olaf Kaiser, Manuel Ferrer, Yulia S. Sabirova, H. Lünsdorf, Tatyana N. Chernikova, Olga V. Golyshina, Michail M. Yakimov, Alfred Pühler, Kenneth N. Ti

Journal:

Journal of Biotechnology

Year:

2003

Language:

english

File:

PDF, 113 KB

english, 2003

3

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant

Bremges, Andreas, Maus, Irena, Belmann, Peter, Eikmeyer, Felix, Winkler, Anika, Albersmeier, Andreas, Pühler, Alfred, Schlüter, Andreas, Sczyrba, Alexander

Journal:

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

4

Proteome analysis of Corynebacterium glutamicum

Thomas Hermann, Walter Pfefferle, Christian Baumann, Eberhard Busker, Steffen Schaffer, Michael Bott, Hermann Sahm, Nicole Dusch, Jörn Kalinowski, Alfred Pühler, Anne K. Bendt, Reinhard Krämer, Andrea

Journal:

ELECTROPHORESIS

Year:

2001

Language:

english

File:

PDF, 217 KB

english, 2001

5

Die Molekularbiologie der Stickstofffixierung bei Klebsiella pneumoniae

Prof. Dr Alfred Pühler

Journal:

Biologie in unserer Zeit

Year:

1979

Language:

german

File:

PDF, 1.50 MB

german, 1979

6

Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor

Lutz Krause, Naryttza N. Diaz, Robert A. Edwards, Karl-Heinz Gartemann, Holger Krömeke, Heiko Neuweger, Alfred Pühler, Kai J. Runte, Andreas Schlüter, Jens Stoye, Rafael Szczepanowski, Andreas Tauch,

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 640 KB

english, 2008

7

The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome

Susanne Schneiker-Bekel, Daniel Wibberg, Thomas Bekel, Jochen Blom, Burkhard Linke, Heiko Neuweger, Michael Stiens, Frank-Jörg Vorhölter, Stefan Weidner, Alexander Goesmann, Alfred Pühler, Andreas Sch

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 2.39 MB

english, 2011

8

Reduced survival of a RecA-deficient Sinorhizobium meliloti strain in sterile and non-sterile soil during heat stress

Uwe Dresing, Margit Hagen, Werner Selbitschka, Alfred Pühler, Mathias Keller

Journal:

FEMS Microbiology Ecology

Year:

1998

Language:

english

File:

PDF, 500 KB

english, 1998

9

The promoter of theVicia fabaL. VfENOD-GRP3 gene encoding a glycine-rich early nodulin mediates a predominant gene expression in the interzone II-III region of transgenicVicia hirsutaroot nodules

Helge Küster, Hans-joachim Quandt, Inge Broer, Andreas M. Perlick, Alfred Pühler

Journal:

Plant Molecular Biology

Year:

1995

Language:

english

File:

PDF, 3.15 MB

english, 1995

10

Genetic basis of enterobacterial repetitive intergenic consensus (ERIC)-PCR fingerprint pattern in Sinorhizobium meliloti and identification of S. meliloti employing PCR primers derived from an ERIC-PCR fragment

S. Niemann, Tanja Dammann-Kalinowski, Anja Nagel, Alfred Pühler, W. Selbitschka

Journal:

Archives of Microbiology

Year:

1999

Language:

english

File:

PDF, 171 KB

english, 1999

11

Reduced survival of a RecA-deficient Sinorhizobium meliloti strain in sterile and non-sterile soil during heat stress

Uwe Dresing, Margit Hagen, Werner Selbitschka, Alfred Pühler, Mathias Keller

Journal:

FEMS Microbiology Ecology

Year:

1998

Language:

english

File:

PDF, 496 KB

english, 1998

12

Bioökonomie in Deutschland – ein Instrument zur Lösung globaler Herausforderungen

Prof. Dr. Alfred Pühler

Journal:

Biologie in unserer Zeit

Year:

2012

Language:

german

File:

PDF, 80 KB

german, 2012

13

Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum

Andreas Schäfer, Andreas Tauch, Wolfgang Jäger, Jörn Kalinowski, Georg Thierbach, Alfred Pühler

Journal:

Year:

1994

Language:

english

File:

PDF, 524 KB

english, 1994

14

Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology

Alexander Goesmann, Burkhard Linke, Oliver Rupp, Lutz Krause, Daniela Bartels, Michael Dondrup, Alice C McHardy, Andreas Wilke, Alfred Pühler, Folker Meyer

Journal:

Journal of Biotechnology

Year:

2003

Language:

english

File:

PDF, 453 KB

english, 2003

15

Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant

Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Cibis, Katharina, Eikmeyer, Felix-Gregor, König, Helmut, Pühler, Alfred, Schlüter, Andreas

Journal:

Journal of Biotechnology

Year:

2013

Language:

english

File:

PDF, 432 KB

english, 2013

16

Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor

Hahnke, Sarah, Maus, Irena, Wibberg, Daniel, Tomazetto, Geizecler, Pühler, Alfred, Klocke, Michael, Schlüter, Andreas

Journal:

Journal of Biotechnology

Year:

2015

Language:

english

File:

PDF, 333 KB

english, 2015

17

Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants

Hassa, Julia, Maus, Irena, Off, Sandra, Pühler, Alfred, Scherer, Paul, Klocke, Michael, Schlüter, Andreas

Journal:

Applied Microbiology and Biotechnology

Year:

2018

Language:

english

File:

PDF, 1.97 MB

english, 2018

18

Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes

Nelkner, Johanna, Henke, Christian, Lin, Timo Wentong, Pätzold, Wiebke, Hassa, Julia, Jaenicke, Sebastian, Grosch, Rita, Pühler, Alfred, Sczyrba, Alexander, Schlüter, Andreas

Journal:

Year:

2019

Language:

english

File:

PDF, 4.05 MB

english, 2019

19

Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110

Schaffert, Lena, März, Camilla, Burkhardt, Lisa, Droste, Julian, Brandt, David, Busche, Tobias, Rosen, Winfried, Schneiker-Bekel, Susanne, Persicke, Marcus, Pühler, Alfred, Kalinowski, Jörn

Journal:

Microbial Cell Factories

Year:

2019

Language:

english

File:

PDF, 3.21 MB

english, 2019

20

Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110

Schaffert, Lena, Schneiker-Bekel, Susanne, Dymek, Saskia, Droste, Julian, Persicke, Marcus, Busche, Tobias, Brandt, David, Pühler, Alfred, Kalinowski, Jörn

Journal:

Frontiers in Microbiology

Year:

2019

File:

PDF, 8.77 MB

2019

21

Der Resistenzfaktor: ein extrachromosomaler DNA-Ring

Journal:

Biologie in unserer Zeit

Year:

1975

Language:

german

File:

PDF, 1.75 MB

german, 1975

22

Molekulargenetik am Beispiel Aminosäure-produzierender Corynebakterien

Prof. Dr. Alfred Pühler, Dr. Jörn Kalinowski

Journal:

Biologie in unserer Zeit

Year:

1995

Language:

german

File:

PDF, 1.25 MB

german, 1995

23

Freisetzung gentechnisch veränderter Bakterien: Leuchtmarkierte Zellen von Sinorhizobium melilotiim Boden

Werner Selbitschka, Mathias Keller, Christoph C. Tebbe, Alfred Pühler

Journal:

Biologie in unserer Zeit

Year:

2003

Language:

german

File:

PDF, 662 KB

german, 2003

24

Vorbereitung eines Freilandexperiments

Dr. Werner Selbitschka, Dr. Mathias Keller, Prof. Dr. Alfred Pühler

Journal:

Biologie in unserer Zeit

Year:

1997

Language:

german

File:

PDF, 1.18 MB

german, 1997

25

A biological containment system for Rhizobium meliloti based on the use of recombination-deficient (recA−) strains

Werner Selbitschka, Uwe Dresing, Margit Hagen, Stefan Niemann, Alfred Pühler

Journal:

FEMS Microbiology Ecology

Year:

1995

Language:

english

File:

PDF, 993 KB

english, 1995

26

Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant

Andreas Schlüter, Lutz Krause, Rafael Szczepanowski, Alexander Goesmann, Alfred Pühler

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 327 KB

english, 2008

27

Genome research in the light of ultrafast sequencing technologies

Alfred Pühler, Werner Selbitschka

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 121 KB

english, 2008

28

Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11

Michael Stiens, Anke Becker, Thomas Bekel, Victoria Gödde, Alexander Goesmann, Karsten Niehaus, Susanne Schneiker-Bekel, Werner Selbitschka, Stefan Weidner, Andreas Schlüter, Alfred Pühler

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 1006 KB

english, 2008

29

The Sequence Analysis and Management System – SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies

Thomas Bekel, Kolja Henckel, Helge Küster, Folker Meyer, Virginie Mittard Runte, Heiko Neuweger, Daniel Paarmann, Oliver Rupp, Martha Zakrzewski, Alfred Pühler, Jens Stoye, Alexander Goesmann

Journal:

Journal of Biotechnology

Year:

2009

Language:

english

File:

PDF, 1.92 MB

english, 2009

30

Functional genome research on bacteria relevant for agriculture, environment and biotechnology

Alfred Pühler, Werner Selbitschka

Journal:

Journal of Biotechnology

Year:

2009

Language:

english

File:

PDF, 129 KB

english, 2009

31

Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing

Magdalena Kröber, Thomas Bekel, Naryttza N. Diaz, Alexander Goesmann, Sebastian Jaenicke, Lutz Krause, Dimitri Miller, Kai J. Runte, Prisca Viehöver, Alfred Pühler, Andreas Schlüter

Journal:

Journal of Biotechnology

Year:

2009

Language:

english

File:

PDF, 1.00 MB

english, 2009

32

The transcriptional regulatory repertoire of Corynebacterium glutamicum: Reconstruction of the network controlling pathways involved in lysine and glutamate production

Karina Brinkrolf, Jasmin Schröder, Alfred Pühler, Andreas Tauch

Journal:

Journal of Biotechnology

Year:

2010

Language:

english

File:

PDF, 663 KB

english, 2010

33

Size exclusion chromatography—An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites

Marcus Persicke, Jens Plassmeier, Heiko Neuweger, Christian Rückert, Alfred Pühler, Jörn Kalinowski

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 387 KB

english, 2011

34

Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology

Patrick Schwientek, Rafael Szczepanowski, Christian Rückert, Jens Stoye, Alfred Pühler

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.27 MB

english, 2011

35

High-quality genome sequence of Pichia pastoris CBS7435

Andreas Küberl, Jessica Schneider, Gerhard G. Thallinger, Ingund Anderl, Daniel Wibberg, Tanja Hajek, Sebastian Jaenicke, Karina Brinkrolf, Alexander Goesmann, Rafael Szczepanowski, Alfred Pühler, Hel

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.02 MB

english, 2011

36

Insights into the genome of the xanthan-producing phytopathogen Xanthomonas arboricola pv. pruni 109 by comparative genomic hybridization

Laurí Mayer, Claire Tondo Vendruscolo, Wladimir Padilha da Silva, Frank-Jörg Vorhölter, Anke Becker, Alfred Pühler

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 727 KB

english, 2011

37

Erratum to “Size exclusion chromatography—An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites” [J. Biotechnol. 154 (2–3) (2011) 171–178]

Marcus Persicke, Jens Plassmeier, Heiko Neuweger, Christian Rückert, Alfred Pühler, Jörn Kalinowski

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 273 KB

english, 2011

38

New Frontiers in Microbial Genome Research

Alfred Pühler, Werner Selbitschka

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 125 KB

english, 2011

39

Molecular basics of mycorrhizal symbioses

Alfred Pühler, Dieter Strack

Journal:

Year:

2007

Language:

english

File:

PDF, 76 KB

english, 2007

40

Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant

Thomas Tennstedt, Rafael Szczepanowski, Sebastian Braun, Alfred Pühler, Andreas Schlüter

Journal:

FEMS Microbiology Ecology

Year:

2003

Language:

english

File:

PDF, 410 KB

english, 2003

41

Suppression of an elicitor-induced oxidative burst reaction in Medicago sativa cell cultures by Sinorhizobium meliloti lipopolysaccharides

Ulrike Albus, Ruth Baier, Otto Holst, Alfred Pühler, Karsten Niehaus

Journal:

New Phytologist

Year:

2001

Language:

english

File:

PDF, 470 KB

english, 2001

42

Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogenXanthomonas campestris

Lian Zhou, Frank-Jörg Vorhölter, Yong-Qiang He, Bo-Le Jiang, Ji-Liang Tang, Yuquan Xu, Alfred Pühler, Ya-Wen He

Journal:

Year:

2011

Language:

english

File:

PDF, 710 KB

english, 2011

43

The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) inCorynebacterium glutamicum

Lars Gaigalat, Jan-Philip Schlüter, Michelle Hartmann, Sascha Mormann, Andreas Tauch, Alfred Pühler, Jörn Kalinowski

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.09 MB

english, 2007

44

Next-generation sequencing of the CHO cell transcriptome

Jennifer Becker, Christina Timmermann, Tobias Jakobi, Oliver Rupp, Rafael Szczepanowski, Matthias Hackl, Alexander Goesmann, Andreas Tauch, Nicole Borth, Johannes Grillari, Alfred Pühler, Thomas Noll,

Journal:

BMC Proceedings

Year:

2011

Language:

english

File:

PDF, 134 KB

english, 2011

45

Comparing expression level-dependent features in codon usage with protein abundance: An analysis of ‘predictive proteomics’

Alice C. McHardy, Alfred Pühler, Jörn Kalinowski, Folker Meyer

Journal:

Year:

2004

Language:

english

File:

PDF, 384 KB

english, 2004

46

The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Corynebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032

Nicole Hansmeier, Tzu-Chiao Chao, Alfred Pühler, Andreas Tauch, Jörn Kalinowski

Journal:

Year:

2006

Language:

english

File:

PDF, 1.04 MB

english, 2006

47

Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae

Nicole Hansmeier, Tzu-Chiao Chao, Jörn Kalinowski, Alfred Pühler, Andreas Tauch

Journal:

Year:

2006

Language:

english

File:

PDF, 756 KB

english, 2006

48

A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411

Nicole Hansmeier, Tzu-Chiao Chao, Svenja Daschkey, Mathias Müsken, Jörn Kalinowski, Alfred Pühler, Andreas Tauch

Journal:

Year:

2007

Language:

english

File:

PDF, 778 KB

english, 2007

49

The nodule-specificVfENOD-GRP3gene encoding a glycine-rich early nodulin is located on chromosome I ofVicia fabaL. and is predominantly expressed in the interzone II-III of root nodules

Helge Küster, Gerald Schröder, Martin Frühling, Uta Pich, Mechthild Rieping, Ingo Schubert, Andreas M. Perlick, Alfred Pühler

Journal:

Plant Molecular Biology

Year:

1995

Language:

english

File:

PDF, 2.34 MB

english, 1995

50

Expression ofRhizobium melilotigenes for nitrogen fixation inEscherichia coliminicells: Mapping of the subunit of the nitrogenase reductase

Gerhard Weber, Alfred Pühler

Journal:

Plant Molecular Biology

Year:

1982

Language:

english

File:

PDF, 1.36 MB

english, 1982

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